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Resource "graphic-example-1" Version "1" (MolecularSequence)

Tags:

XML or JSON representation . provenance for this resource

Generated Narrative with Details

id: graphic-example-1

type: dna

coordinateSystem: 0

ReferenceSeqs

-ReferenceSeqIdStrandWindowStartWindowEnd
*NC_000002.12 (Details : {http://www.ncbi.nlm.nih.gov/nuccore code 'NC_000002.12' = 'NC_000002.12)watson128273724128273732

Variants

-StartEndObservedAlleleReferenceAlleleCigar
*128273725128273726GT1M

pointer: MolecularSequence/graphic-example-2


{
  "resourceType" : "MolecularSequence",
  "id" : "graphic-example-1",
  "meta" : {
    "versionId" : "1",
    "lastUpdated" : "2018-12-14T02:02:38.614Z"
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: graphic-example-1</p><p><b>type</b>: dna</p><p><b>coordinateSystem</b>: 0</p><h3>ReferenceSeqs</h3><table><tr><td>-</td><td><b>ReferenceSeqId</b></td><td><b>Strand</b></td><td><b>WindowStart</b></td><td><b>WindowEnd</b></td></tr><tr><td>*</td><td>NC_000002.12 <span>(Details : {http://www.ncbi.nlm.nih.gov/nuccore code 'NC_000002.12' = 'NC_000002.12)</span></td><td>watson</td><td>128273724</td><td>128273732</td></tr></table><h3>Variants</h3><table><tr><td>-</td><td><b>Start</b></td><td><b>End</b></td><td><b>ObservedAllele</b></td><td><b>ReferenceAllele</b></td><td><b>Cigar</b></td></tr><tr><td>*</td><td>128273725</td><td>128273726</td><td>G</td><td>T</td><td>1M</td></tr></table><p><b>pointer</b>: <a>MolecularSequence/graphic-example-2</a></p></div>"
  },
  "type" : "dna",
  "coordinateSystem" : 0,
  "referenceSeq" : {
    "referenceSeqId" : {
      "coding" : [
        {
          "system" : "http://www.ncbi.nlm.nih.gov/nuccore",
          "code" : "NC_000002.12"
        }
      ]
    },
    "strand" : "watson",
    "windowStart" : 128273724,
    "windowEnd" : 128273732
  },
  "variant" : [
    {
      "start" : 128273725,
      "end" : 128273726,
      "observedAllele" : "G",
      "referenceAllele" : "T",
      "cigar" : "1M"
    }
  ],
  "pointer" : [
    {
      "reference" : "MolecularSequence/graphic-example-2"
    }
  ]
}