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Resource "example-phenotype" Version "1" (Observation)

Tags:

XML or JSON representation . provenance for this resource

Generated Narrative with Details

id: example-phenotype

status: final

code: CYP2C9 gene product metabolic activity interpretation (Details : {LOINC code '79716-7' = 'CYP2C9 gene product metabolic activity interpretation in Blood or Tissue Qualitative by CPIC', given as 'CYP2C9 gene product metabolic activity interpretation'})

subject: J*********** C***********

issued: Apr 3, 2013 3:30:10 PM

value: Normal metabolizer (Details : {LOINC code 'LA25391-6' = 'Normal metabolizer', given as 'Normal metabolizer'})

specimen: Molecular Specimen ID: MLD45-Z4-1234

derivedFrom: Observation/example-diplotype1


{
  "resourceType" : "Observation",
  "id" : "example-phenotype",
  "meta" : {
    "versionId" : "1",
    "lastUpdated" : "2018-12-14T02:02:41.426Z"
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: example-phenotype</p><p><b>status</b>: final</p><p><b>code</b>: CYP2C9 gene product metabolic activity interpretation <span>(Details : {LOINC code '79716-7' = 'CYP2C9 gene product metabolic activity interpretation in Blood or Tissue Qualitative by CPIC', given as 'CYP2C9 gene product metabolic activity interpretation'})</span></p><p><b>subject</b>: <a>J*********** C***********</a></p><p><b>issued</b>: Apr 3, 2013 3:30:10 PM</p><p><b>value</b>: Normal metabolizer <span>(Details : {LOINC code 'LA25391-6' = 'Normal metabolizer', given as 'Normal metabolizer'})</span></p><p><b>specimen</b>: <a>Molecular Specimen ID: MLD45-Z4-1234</a></p><p><b>derivedFrom</b>: <a>Observation/example-diplotype1</a></p></div>"
  },
  "extension" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/observation-geneticsGene",
      "valueCodeableConcept" : {
        "coding" : [
          {
            "system" : "http://www.genenames.org",
            "code" : "2623",
            "display" : "CYP2C9"
          }
        ]
      }
    }
  ],
  "status" : "final",
  "code" : {
    "coding" : [
      {
        "system" : "http://loinc.org",
        "code" : "79716-7",
        "display" : "CYP2C9 gene product metabolic activity interpretation"
      }
    ]
  },
  "subject" : {
    "reference" : "Patient/727127",
    "display" : "J*********** C***********"
  },
  "issued" : "2013-04-03T15:30:10+01:00",
  "valueCodeableConcept" : {
    "coding" : [
      {
        "system" : "http://loinc.org",
        "code" : "LA25391-6",
        "display" : "Normal metabolizer"
      }
    ]
  },
  "specimen" : {
    "reference" : "Specimen/genetics-example1-somatic",
    "display" : "Molecular Specimen ID: MLD45-Z4-1234"
  },
  "derivedFrom" : [
    {
      "reference" : "Observation/example-diplotype1"
    }
  ]
}