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Specimen "vma-urine" Version "1"

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Generated Narrative with Details

id: vma-urine

accessionIdentifier: X352356

status: available

type: Urine, Random (Details : {http://terminology.hl7.org/CodeSystem/v2-0487 code 'RANDU' = 'Urine, Random', given as 'Urine, Random'})

subject: Patient/example

receivedTime: Aug 18, 2015 7:03:00 AM

Collections

-CollectorCollected[x]
*Practitioner/f202Aug 18, 2015 7:03:00 AM

Processings

-DescriptionProcedureAdditiveTime[x]
*Acidify to pH < 3.0 with 6 N HCl.Acidification (Details : {http://terminology.hl7.org/CodeSystem/v2-0373 code 'ACID' = 'Acidification)6 N HClAug 18, 2015 8:10:00 AM

Containers

-TypeCapacitySpecimenQuantity
*Non-sterile specimen container (Details )50 mls10 mls

{
  "resourceType" : "Specimen",
  "id" : "vma-urine",
  "meta" : {
    "versionId" : "1",
    "lastUpdated" : "2018-12-14T02:03:49.863Z"
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: vma-urine</p><p><b>accessionIdentifier</b>: X352356</p><p><b>status</b>: available</p><p><b>type</b>: Urine, Random <span>(Details : {http://terminology.hl7.org/CodeSystem/v2-0487 code 'RANDU' = 'Urine, Random', given as 'Urine, Random'})</span></p><p><b>subject</b>: <a>Patient/example</a></p><p><b>receivedTime</b>: Aug 18, 2015 7:03:00 AM</p><h3>Collections</h3><table><tr><td>-</td><td><b>Collector</b></td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td><a>Practitioner/f202</a></td><td>Aug 18, 2015 7:03:00 AM</td></tr></table><h3>Processings</h3><table><tr><td>-</td><td><b>Description</b></td><td><b>Procedure</b></td><td><b>Additive</b></td><td><b>Time[x]</b></td></tr><tr><td>*</td><td>Acidify to pH &lt; 3.0 with 6 N HCl.</td><td>Acidification <span>(Details : {http://terminology.hl7.org/CodeSystem/v2-0373 code 'ACID' = 'Acidification)</span></td><td>6 N HCl</td><td>Aug 18, 2015 8:10:00 AM</td></tr></table><h3>Containers</h3><table><tr><td>-</td><td><b>Type</b></td><td><b>Capacity</b></td><td><b>SpecimenQuantity</b></td></tr><tr><td>*</td><td>Non-sterile specimen container <span>(Details )</span></td><td>50 mls</td><td>10 mls</td></tr></table></div>"
  },
  "accessionIdentifier" : {
    "system" : "http://lab.acme.org/specimens/2015",
    "value" : "X352356"
  },
  "status" : "available",
  "type" : {
    "coding" : [
      {
        "system" : "http://terminology.hl7.org/CodeSystem/v2-0487",
        "code" : "RANDU",
        "display" : "Urine, Random"
      }
    ]
  },
  "subject" : {
    "reference" : "Patient/example"
  },
  "receivedTime" : "2015-08-18T07:03:00Z",
  "collection" : {
    "collector" : {
      "reference" : "Practitioner/f202"
    },
    "collectedDateTime" : "2015-08-18T07:03:00Z"
  },
  "processing" : [
    {
      "description" : "Acidify to pH < 3.0 with 6 N HCl.",
      "procedure" : {
        "coding" : [
          {
            "system" : "http://terminology.hl7.org/CodeSystem/v2-0373",
            "code" : "ACID"
          }
        ]
      },
      "additive" : [
        {
          "display" : "6 N HCl"
        }
      ],
      "timeDateTime" : "2015-08-18T08:10:00Z"
    }
  ],
  "container" : [
    {
      "type" : {
        "text" : "Non-sterile specimen container"
      },
      "capacity" : {
        "value" : 50,
        "unit" : "mls"
      },
      "specimenQuantity" : {
        "value" : 10,
        "unit" : "mls"
      }
    }
  ]
}

Specimen "sst" Version "1"

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This Resource , XML or JSON representation, or the full version history.. provenance for this resource
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Generated Narrative with Details

id: sst

accessionIdentifier: 20150816-00124

type: Serum sample (Details : {SNOMED CT code '119364003' = 'Serum specimen', given as 'Serum sample'})

subject: Patient/pat2

request: ServiceRequest/ft4

Collections

-CollectorCollected[x]
*Practitioner/f202Aug 16, 2015 6:40:17 AM

Containers

-Type
*Serum Separator Tube (Details : {http://acme.com/labs code 'SST' = 'SST', given as 'Serum Separator Tube'})

{
  "resourceType" : "Specimen",
  "id" : "sst",
  "meta" : {
    "versionId" : "1",
    "lastUpdated" : "2018-12-14T02:03:49.832Z"
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: sst</p><p><b>accessionIdentifier</b>: 20150816-00124</p><p><b>type</b>: Serum sample <span>(Details : {SNOMED CT code '119364003' = 'Serum specimen', given as 'Serum sample'})</span></p><p><b>subject</b>: <a>Patient/pat2</a></p><p><b>request</b>: <a>ServiceRequest/ft4</a></p><h3>Collections</h3><table><tr><td>-</td><td><b>Collector</b></td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td><a>Practitioner/f202</a></td><td>Aug 16, 2015 6:40:17 AM</td></tr></table><h3>Containers</h3><table><tr><td>-</td><td><b>Type</b></td></tr><tr><td>*</td><td>Serum Separator Tube <span>(Details : {http://acme.com/labs code 'SST' = 'SST', given as 'Serum Separator Tube'})</span></td></tr></table></div>"
  },
  "accessionIdentifier" : {
    "system" : "http://acme.com/labs/accession-ids",
    "value" : "20150816-00124"
  },
  "type" : {
    "coding" : [
      {
        "system" : "http://snomed.info/sct",
        "code" : "119364003",
        "display" : "Serum sample"
      }
    ]
  },
  "subject" : {
    "reference" : "Patient/pat2"
  },
  "request" : [
    {
      "reference" : "ServiceRequest/ft4"
    }
  ],
  "collection" : {
    "collector" : {
      "reference" : "Practitioner/f202"
    },
    "collectedDateTime" : "2015-08-16T06:40:17Z"
  },
  "container" : [
    {
      "type" : {
        "coding" : [
          {
            "system" : "http://acme.com/labs",
            "code" : "SST",
            "display" : "Serum Separator Tube"
          }
        ]
      }
    }
  ]
}

Specimen "pooled-serum" Version "1"

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This Resource , XML or JSON representation, or the full version history.. provenance for this resource
Updated: by

Generated Narrative with Details

id: pooled-serum

accessionIdentifier: 20171120-1234

type: Pooled serum sample (Details : {https://vetmed.iastate.edu/vdl code 'Serum sample, pooled' = 'Serum sample, pooled', given as 'Serum sample, pooled'})

subject: Group/herd1

Collections

-CollectorCollected[x]
*James Herriot, FRCVSNov 14, 2017

Containers

-Type
*Red Top Blood Collection Tube (Details : {https://vetmed.iastate.edu/vdl code 'RTT' = 'RTT', given as 'Red Top Tube'})

note: Pooled serum sample from 30 individuals


{
  "resourceType" : "Specimen",
  "id" : "pooled-serum",
  "meta" : {
    "versionId" : "1",
    "lastUpdated" : "2018-12-14T02:03:49.785Z"
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: pooled-serum</p><p><b>accessionIdentifier</b>: 20171120-1234</p><p><b>type</b>: Pooled serum sample <span>(Details : {https://vetmed.iastate.edu/vdl code 'Serum sample, pooled' = 'Serum sample, pooled', given as 'Serum sample, pooled'})</span></p><p><b>subject</b>: <a>Group/herd1</a></p><h3>Collections</h3><table><tr><td>-</td><td><b>Collector</b></td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td>James Herriot, FRCVS</td><td>Nov 14, 2017</td></tr></table><h3>Containers</h3><table><tr><td>-</td><td><b>Type</b></td></tr><tr><td>*</td><td>Red Top Blood Collection Tube <span>(Details : {https://vetmed.iastate.edu/vdl code 'RTT' = 'RTT', given as 'Red Top Tube'})</span></td></tr></table><p><b>note</b>: Pooled serum sample from 30 individuals</p></div>"
  },
  "accessionIdentifier" : {
    "system" : "https://vetmed.iastate.edu/vdl",
    "value" : "20171120-1234"
  },
  "type" : {
    "coding" : [
      {
        "system" : "https://vetmed.iastate.edu/vdl",
        "code" : "Serum sample, pooled",
        "display" : "Serum sample, pooled"
      }
    ],
    "text" : "Pooled serum sample"
  },
  "subject" : {
    "reference" : "Group/herd1"
  },
  "collection" : {
    "collector" : {
      "display" : "James Herriot, FRCVS"
    },
    "collectedDateTime" : "2017-11-14"
  },
  "container" : [
    {
      "type" : {
        "coding" : [
          {
            "system" : "https://vetmed.iastate.edu/vdl",
            "code" : "RTT",
            "display" : "Red Top Tube"
          }
        ],
        "text" : "Red Top Blood Collection Tube"
      }
    }
  ],
  "note" : [
    {
      "text" : "Pooled serum sample from 30 individuals"
    }
  ]
}

Specimen "isolate" Version "1"

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Updated: by

Generated Narrative with Details

id: isolate

contained:

accessionIdentifier: X352356-ISO1

status: available

type: Bacterial isolate specimen (Details : {SNOMED CT code '429951000124103' = 'Bacterial isolate specimen (specimen)', given as 'Bacterial isolate specimen'})

subject: Patient/example

receivedTime: Aug 18, 2015 7:03:00 AM

parent: id: stool; X352356; status: unavailable; Stool specimen (Details : {SNOMED CT code '119339001' = 'Stool specimen', given as 'Stool specimen'}); receivedTime: Aug 16, 2015 7:03:00 AM

Collections

-CollectorCollected[x]Method
*Practitioner/f202Aug 16, 2015 7:03:00 AMPlates, Blood Agar (Details : {http://terminology.hl7.org/CodeSystem/v2-0488 code 'BAP' = 'Plates, Blood Agar)

note: Patient dropped off specimen


{
  "resourceType" : "Specimen",
  "id" : "isolate",
  "meta" : {
    "versionId" : "1",
    "lastUpdated" : "2018-12-14T02:03:49.723Z"
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: isolate</p><p><b>contained</b>: </p><p><b>accessionIdentifier</b>: X352356-ISO1</p><p><b>status</b>: available</p><p><b>type</b>: Bacterial isolate specimen <span>(Details : {SNOMED CT code '429951000124103' = 'Bacterial isolate specimen (specimen)', given as 'Bacterial isolate specimen'})</span></p><p><b>subject</b>: <a>Patient/example</a></p><p><b>receivedTime</b>: Aug 18, 2015 7:03:00 AM</p><p><b>parent</b>: id: stool; X352356; status: unavailable; Stool specimen <span>(Details : {SNOMED CT code '119339001' = 'Stool specimen', given as 'Stool specimen'})</span>; receivedTime: Aug 16, 2015 7:03:00 AM</p><h3>Collections</h3><table><tr><td>-</td><td><b>Collector</b></td><td><b>Collected[x]</b></td><td><b>Method</b></td></tr><tr><td>*</td><td><a>Practitioner/f202</a></td><td>Aug 16, 2015 7:03:00 AM</td><td>Plates, Blood Agar <span>(Details : {http://terminology.hl7.org/CodeSystem/v2-0488 code 'BAP' = 'Plates, Blood Agar)</span></td></tr></table><p><b>note</b>: Patient dropped off specimen</p></div>"
  },
  "contained" : [
    {
      "resourceType" : "Specimen",
      "id" : "stool",
      "accessionIdentifier" : {
        "system" : "http://lab.acme.org/specimens/2015",
        "value" : "X352356"
      },
      "status" : "unavailable",
      "type" : {
        "coding" : [
          {
            "system" : "http://snomed.info/sct",
            "code" : "119339001",
            "display" : "Stool specimen"
          }
        ]
      },
      "subject" : {
        "reference" : "Patient/example"
      },
      "receivedTime" : "2015-08-16T07:03:00Z",
      "collection" : {
        "collector" : {
          "display" : "Patient"
        },
        "collectedDateTime" : "2011-08-16T06:15:00Z",
        "method" : {
          "coding" : [
            {
              "system" : "http://terminology.hl7.org/CodeSystem/v2-0488",
              "code" : "LNV"
            }
          ]
        }
      }
    }
  ],
  "accessionIdentifier" : {
    "system" : "http://lab.acme.org/specimens/2011",
    "value" : "X352356-ISO1"
  },
  "status" : "available",
  "type" : {
    "coding" : [
      {
        "system" : "http://snomed.info/sct",
        "code" : "429951000124103",
        "display" : "Bacterial isolate specimen"
      }
    ]
  },
  "subject" : {
    "reference" : "Patient/example"
  },
  "receivedTime" : "2015-08-18T07:03:00Z",
  "parent" : [
    {
      "reference" : "#stool"
    }
  ],
  "collection" : {
    "collector" : {
      "reference" : "Practitioner/f202"
    },
    "collectedDateTime" : "2015-08-16T07:03:00Z",
    "method" : {
      "coding" : [
        {
          "system" : "http://terminology.hl7.org/CodeSystem/v2-0488",
          "code" : "BAP"
        }
      ]
    }
  },
  "note" : [
    {
      "text" : "Patient dropped off specimen"
    }
  ]
}

Specimen "101" Version "1"

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Updated: by

Generated Narrative with Details

id: 101

contained:

identifier: 23234352356

accessionIdentifier: X352356

status: available

type: Venous blood specimen (Details : {SNOMED CT code '122555007' = 'Venous blood specimen', given as 'Venous blood specimen'})

subject: Peter Patient

receivedTime: Mar 4, 2011 7:03:00 AM

request: ServiceRequest/example

Collections

-CollectorCollected[x]QuantityMethodBodySite
*Practitioner/exampleMay 30, 2011 6:15:00 AM6 mLLine, Venous (Details : {http://terminology.hl7.org/CodeSystem/v2-0488 code 'LNV' = 'Line, Venous)Right median cubital vein (Details : {SNOMED CT code '49852007' = 'Median cubital vein', given as 'Structure of median cubital vein (body structure)'})

Containers

-IdentifierDescriptionTypeCapacitySpecimenQuantityAdditive[x]
*48736-15394-75465Green Gel tubeVacutainer (Details )10 mL6 mLid: hep; Lithium/Li Heparin (Details : {http://terminology.hl7.org/CodeSystem/v3-EntityCode code 'HEPL' = 'Lithium/Li Heparin)

note: Specimen is grossly lipemic


{
  "resourceType" : "Specimen",
  "id" : "101",
  "meta" : {
    "versionId" : "1",
    "lastUpdated" : "2018-12-14T02:03:49.676Z"
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: 101</p><p><b>contained</b>: </p><p><b>identifier</b>: 23234352356</p><p><b>accessionIdentifier</b>: X352356</p><p><b>status</b>: available</p><p><b>type</b>: Venous blood specimen <span>(Details : {SNOMED CT code '122555007' = 'Venous blood specimen', given as 'Venous blood specimen'})</span></p><p><b>subject</b>: <a>Peter Patient</a></p><p><b>receivedTime</b>: Mar 4, 2011 7:03:00 AM</p><p><b>request</b>: <a>ServiceRequest/example</a></p><h3>Collections</h3><table><tr><td>-</td><td><b>Collector</b></td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>Method</b></td><td><b>BodySite</b></td></tr><tr><td>*</td><td><a>Practitioner/example</a></td><td>May 30, 2011 6:15:00 AM</td><td>6 mL</td><td>Line, Venous <span>(Details : {http://terminology.hl7.org/CodeSystem/v2-0488 code 'LNV' = 'Line, Venous)</span></td><td>Right median cubital vein <span>(Details : {SNOMED CT code '49852007' = 'Median cubital vein', given as 'Structure of median cubital vein (body structure)'})</span></td></tr></table><h3>Containers</h3><table><tr><td>-</td><td><b>Identifier</b></td><td><b>Description</b></td><td><b>Type</b></td><td><b>Capacity</b></td><td><b>SpecimenQuantity</b></td><td><b>Additive[x]</b></td></tr><tr><td>*</td><td>48736-15394-75465</td><td>Green Gel tube</td><td>Vacutainer <span>(Details )</span></td><td>10 mL</td><td>6 mL</td><td>id: hep; Lithium/Li Heparin <span>(Details : {http://terminology.hl7.org/CodeSystem/v3-EntityCode code 'HEPL' = 'Lithium/Li Heparin)</span></td></tr></table><p><b>note</b>: Specimen is grossly lipemic</p></div>"
  },
  "contained" : [
    {
      "resourceType" : "Substance",
      "id" : "hep",
      "code" : {
        "coding" : [
          {
            "system" : "http://terminology.hl7.org/CodeSystem/v3-EntityCode",
            "code" : "HEPL"
          }
        ]
      }
    }
  ],
  "identifier" : [
    {
      "system" : "http://ehr.acme.org/identifiers/collections",
      "value" : "23234352356"
    }
  ],
  "accessionIdentifier" : {
    "system" : "http://lab.acme.org/specimens/2011",
    "value" : "X352356"
  },
  "status" : "available",
  "type" : {
    "coding" : [
      {
        "system" : "http://snomed.info/sct",
        "code" : "122555007",
        "display" : "Venous blood specimen"
      }
    ]
  },
  "subject" : {
    "reference" : "Patient/example",
    "display" : "Peter Patient"
  },
  "receivedTime" : "2011-03-04T07:03:00Z",
  "request" : [
    {
      "reference" : "ServiceRequest/example"
    }
  ],
  "collection" : {
    "collector" : {
      "reference" : "Practitioner/example"
    },
    "collectedDateTime" : "2011-05-30T06:15:00Z",
    "quantity" : {
      "value" : 6,
      "unit" : "mL"
    },
    "method" : {
      "coding" : [
        {
          "system" : "http://terminology.hl7.org/CodeSystem/v2-0488",
          "code" : "LNV"
        }
      ]
    },
    "bodySite" : {
      "coding" : [
        {
          "system" : "http://snomed.info/sct",
          "code" : "49852007",
          "display" : "Structure of median cubital vein (body structure)"
        }
      ],
      "text" : "Right median cubital vein"
    }
  },
  "container" : [
    {
      "identifier" : [
        {
          "value" : "48736-15394-75465"
        }
      ],
      "description" : "Green Gel tube",
      "type" : {
        "text" : "Vacutainer"
      },
      "capacity" : {
        "value" : 10,
        "unit" : "mL"
      },
      "specimenQuantity" : {
        "value" : 6,
        "unit" : "mL"
      },
      "additiveReference" : {
        "reference" : "#hep"
      }
    }
  ],
  "note" : [
    {
      "text" : "Specimen is grossly lipemic"
    }
  ]
}